6N4N image
Deposition Date 2018-11-19
Release Date 2019-09-11
Last Version Date 2023-10-11
Entry Detail
PDB ID:
6N4N
Title:
Crystal structure of the designed protein DNCR2/danoprevir/NS3a complex
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.29 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:NS3 protease
Chain IDs:A, B
Chain Length:197
Number of Molecules:2
Biological Source:Hepacivirus C
Polymer Type:polypeptide(L)
Molecule:Rosetta-designed danoprevir/NS3a complex reader 2
Chain IDs:C, D (auth: F)
Chain Length:229
Number of Molecules:2
Biological Source:synthetic construct
Primary Citation
Multi-input chemical control of protein dimerization for programming graded cellular responses.
Nat.Biotechnol. 37 1209 1216 (2019)
PMID: 31501561 DOI: 10.1038/s41587-019-0242-8

Abstact

Chemical and optogenetic methods for post-translationally controlling protein function have enabled modulation and engineering of cellular functions. However, most of these methods only confer single-input, single-output control. To increase the diversity of post-translational behaviors that can be programmed, we built a system based on a single protein receiver that can integrate multiple drug inputs, including approved therapeutics. Our system translates drug inputs into diverse outputs using a suite of engineered reader proteins to provide variable dimerization states of the receiver protein. We show that our single receiver protein architecture can be used to program a variety of cellular responses, including graded and proportional dual-output control of transcription and mammalian cell signaling. We apply our tools to titrate the competing activities of the Rac and Rho GTPases to control cell morphology. Our versatile tool set will enable researchers to post-translationally program mammalian cellular processes and to engineer cell therapies.

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