6N38 image
Deposition Date 2018-11-14
Release Date 2018-12-26
Last Version Date 2024-03-20
Entry Detail
PDB ID:
6N38
Title:
Structure of the type VI secretion system TssK-TssF-TssG baseplate subcomplex revealed by cryo-electron microscopy - full map sharpened
Biological Source:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.70 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Putative type VI secretion protein
Gene (Uniprot):EC042_4526
Chain IDs:F (auth: A), G (auth: D), H (auth: B), I (auth: E), J (auth: C), K (auth: F)
Chain Length:322
Number of Molecules:6
Biological Source:Escherichia coli O44:H18 (strain 042 / EAEC)
Polymer Type:polypeptide(L)
Molecule:Putative type VI secretion protein
Gene (Uniprot):EC042_4543
Chain IDs:B (auth: G)
Chain Length:303
Number of Molecules:1
Biological Source:Escherichia coli O44:H18 (strain 042 / EAEC)
Polymer Type:polypeptide(L)
Molecule:Putative type VI secretion protein
Gene (Uniprot):EC042_4542
Chain IDs:A (auth: I), C (auth: H)
Chain Length:587
Number of Molecules:2
Biological Source:Escherichia coli O44:H18 (strain 042 / EAEC)
Polymer Type:polypeptide(L)
Molecule:Unassigned protein
Chain IDs:D (auth: K), E (auth: L)
Chain Length:21
Number of Molecules:2
Biological Source:Escherichia coli O44:H18 (strain 042 / EAEC)
Ligand Molecules
Primary Citation
Structure of the type VI secretion system TssK-TssF-TssG baseplate subcomplex revealed by cryo-electron microscopy.
Nat Commun 9 5385 5385 (2018)
PMID: 30568167 DOI: 10.1038/s41467-018-07796-5

Abstact

Type VI secretion systems (T6SSs) translocate effectors into target cells and are made of a contractile sheath and a tube docked onto a multi-protein transmembrane complex via a baseplate. Although some information is available about the mechanisms of tail contraction leading to effector delivery, the detailed architecture and function of the baseplate remain unknown. Here, we report the 3.7 Å resolution cryo-electron microscopy reconstruction of an enteroaggregative Escherichia coli baseplate subcomplex assembled from TssK, TssF and TssG. The structure reveals two TssK trimers interact with a locally pseudo-3-fold symmetrical complex comprising two copies of TssF and one copy of TssG. TssF and TssG are structurally related to each other and to components of the phage T4 baseplate and of the type IV secretion system, strengthening the evolutionary relationships among these macromolecular machines. These results, together with bacterial two-hybrid assays, provide a structural framework to understand the T6SS baseplate architecture.

Legend

Protein

Chemical

Disease

Primary Citation of related structures