6N1G image
Entry Detail
PDB ID:
6N1G
Title:
Crystal structure of Aquaglyceroporin AQP7
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-11-08
Release Date:
2019-11-13
Method Details:
Experimental Method:
Resolution:
4.00 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
F 41 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Aquaporin-7
Chain IDs:A, B (auth: C), C (auth: B), D
Chain Length:376
Number of Molecules:4
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Aquaporin-7: A Dynamic Aquaglyceroporin With Greater Water and Glycerol Permeability Than Its Bacterial Homolog GlpF.
Front Physiol 11 728 728 (2020)
PMID: 32695023 DOI: 10.3389/fphys.2020.00728

Abstact

Xenopus oocytes expressing human aquaporin-7 (AQP7) exhibit greater osmotic water permeability and 3H-glycerol uptake vs. those expressing the bacterial glycerol facilitator GlpF. AQP7-expressing oocytes exposed to increasing extracellular [glycerol] under isosmolal conditions exhibit increasing swelling rates, whereas GlpF-expressing oocytes do not swell at all. To provide a structural basis for these observed physiological differences, we performed X-ray crystallographic structure determination of AQP7 and molecular-dynamics simulations on AQP7 and GlpF. The structure reveals AQP7 tetramers containing two monomers with 3 glycerols, and two monomers with 2 glycerols in the pore. In contrast to GlpF, no glycerol is bound at the AQP7 selectivity filter (SF), comprising residues F74, G222, Y223, and R229. The AQP7 SF is resolved in its closed state because F74 blocks the passage of small solutes. Molecular dynamics simulations demonstrate that F74 undergoes large and rapid conformational changes, allowing glycerol molecules to permeate without orientational restriction. The more rigid GlpF imposes orientational constraints on glycerol molecules passing through the SF. Moreover, GlpF-W48 (analogous to AQP7-F74) undergoes rare but long-lasting conformational changes that block the pore to H2O and glycerol.

Legend

Protein

Chemical

Disease

Primary Citation of related structures