ISDA

Deposition Date 2018-11-07

Release Date 2019-11-13

Last Version Date 2024-03-13

Entry Detail

PDB ID:

6N0D

Keywords:

DNA BINDING PROTEIN, Hydrolase

Title:

Crystal structure of Tdp1 catalytic domain in complex with compound XZ575

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.45 Å

R-Value Free:

0.19

R-Value Work:

0.16

R-Value Observed:

0.16

Space Group:

P 21 21 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Tyrosyl-DNA phosphodiesterase 1
Gene (Uniprot):TDP1
Chain IDs:A, B
Chain Length:461
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:Q9NUW8 Pfam ID:PF06087 EC:3.1.4.1

Ligand Molecules

EDO

K8J

Primary Citation

Crystal structure of Tdp1 catalytic domain in complex with compound XZ575

Lountos, G.T, Zhao, X.Z, Kiselev, E, Tropea, J.E, Needle, D, Burke Jr, T.R, Pommier, Y, Waugh, D.S.Show

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Primary Citation of related structures