6MZL image
Deposition Date 2018-11-05
Release Date 2018-11-28
Last Version Date 2024-11-13
Entry Detail
PDB ID:
6MZL
Keywords:
Title:
Human TFIID canonical state
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
23.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 1
Gene (Uniprot):TAF1
Chain IDs:A
Chain Length:1872
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 2
Gene (Uniprot):TAF2
Chain IDs:B
Chain Length:1199
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 3
Gene (Uniprot):TAF3
Chain IDs:C
Chain Length:929
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 4
Gene (Uniprot):TAF4
Chain IDs:D, E
Chain Length:1085
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 5,TAF5
Gene (Uniprot):TAF5
Chain IDs:F, G
Chain Length:800
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 6
Gene (Uniprot):TAF6
Chain IDs:H
Chain Length:677
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 6
Gene (Uniprot):TAF6
Chain IDs:I
Chain Length:677
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 7
Gene (Uniprot):TAF7
Chain IDs:J
Chain Length:349
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 8,TAF8
Gene (Uniprot):TAF8
Chain IDs:K
Chain Length:310
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 9, TAF9
Gene (Uniprot):TAF9
Chain IDs:L, M
Chain Length:264
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 10
Gene (Uniprot):TAF10
Chain IDs:N, O
Chain Length:218
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 11
Gene (Uniprot):TAF11
Chain IDs:P
Chain Length:211
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 12
Gene (Uniprot):TAF12
Chain IDs:Q, R
Chain Length:161
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Transcription initiation factor TFIID subunit 13
Gene (Uniprot):TAF13
Chain IDs:S
Chain Length:124
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:TATA-box-binding protein
Gene (Uniprot):TBP
Chain IDs:T
Chain Length:339
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:poly(UNK)
Chain IDs:U (auth: Y)
Chain Length:96
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:poly(UNK)
Chain IDs:V (auth: Z)
Chain Length:238
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure of human TFIID and mechanism of TBP loading onto promoter DNA.
Science 362 ? ? (2018)
PMID: 30442764 DOI: 10.1126/science.aau8872

Abstact

The general transcription factor IID (TFIID) is a critical component of the eukaryotic transcription preinitiation complex (PIC) and is responsible for recognizing the core promoter DNA and initiating PIC assembly. We used cryo-electron microscopy, chemical cross-linking mass spectrometry, and biochemical reconstitution to determine the complete molecular architecture of TFIID and define the conformational landscape of TFIID in the process of TATA box-binding protein (TBP) loading onto promoter DNA. Our structural analysis revealed five structural states of TFIID in the presence of TFIIA and promoter DNA, showing that the initial binding of TFIID to the downstream promoter positions the upstream DNA and facilitates scanning of TBP for a TATA box and the subsequent engagement of the promoter. Our findings provide a mechanistic model for the specific loading of TBP by TFIID onto the promoter.

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Primary Citation of related structures