6MWM image
Entry Detail
PDB ID:
6MWM
Keywords:
Title:
Bat coronavirus HKU4 SUD-C
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2018-10-29
Release Date:
2019-09-11
Method Details:
Experimental Method:
Conformers Calculated:
20
Conformers Submitted:
20
Selection Criteria:
all calculated structures submitted
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Non-structural protein 3
Chain IDs:A
Chain Length:81
Number of Molecules:1
Biological Source:Bat coronavirus HKU4
Ligand Molecules
Primary Citation
Structure of the SARS-Unique Domain C From the Bat Coronavirus HKU4.
Nat Prod Commun 14 1934578X19849202 1934578X19849202 (2019)
PMID: 32395093 DOI: 10.1177/1934578X19849202

Abstact

Coronaviruses (CoVs) that cause infections such as severe acute respiratory syndrome (SARS) and Middle East respiratory syndrome phylogenetically originate from bat CoVs. The coronaviral nonstructural protein 3 (nsp3) has been implicated in viral replication, polyprotein cleavage, and host immune interference. We report the structure of the C domain from the SARS-Unique Domain of bat CoV HKU4. The protein has a frataxin fold, consisting of 5 antiparallel β strands packed against 2 α helices. Bioinformatics analyses and nuclear magnetic resonance experiments were conducted to investigate the function of HKU4 C. The results showed that HKU4 C engages in protein-protein interactions with the nearby M domain of nsp3. The HKU4 C residues involved in protein-protein interactions are conserved in group 2c CoVs, indicating a conserved function.

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Primary Citation of related structures