6MV3 image
Deposition Date 2018-10-24
Release Date 2018-11-14
Last Version Date 2024-05-15
Entry Detail
PDB ID:
6MV3
Title:
NMR structure of the cNTnC-cTnI chimera bound to calcium desensitizer W7
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Troponin C, slow skeletal and cardiac muscles,Troponin I, cardiac muscle chimera
Gene (Uniprot):TNNI3, TNNC1
Mutations:C35S, C84S
Chain IDs:A
Chain Length:125
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structural Changes Induced by the Binding of the Calcium Desensitizer W7 to Cardiac Troponin.
Biochemistry 57 6461 6469 (2018)
PMID: 30376637 DOI: 10.1021/acs.biochem.8b00882

Abstact

Compounds that directly modulate the affinity of the thin filament calcium regulatory proteins in cardiac muscle have potential for treating heart disease. A recent "proof of concept" study showed that the desensitizer W7 can correct hyper-calcium-sensitive sarcomeres from RCM R193H inhibitory subunit troponin I (cTnI) transgenic mice. We have determined the high-resolution nuclear magnetic resonance solution structure of W7 bound to the regulatory domain of calcium binding subunit troponin C (cNTnC)-cTnI cChimera designed to represent the key aspects of the cTnC-cTnI interface. The structure shows that W7 does not perturb the overall structure of the cTnC-cTnI interface, with the helical structure and position of the cTnI switch region remaining intact upon W7 binding. The naphthalene ring of W7 sits in the hydrophobic pocket created by the cNTnC-cTnI switch peptide interface, while the positively charged amine tail extends into the solvent. The positively charged tail of W7 is in the proximity of Arg147 of the cTnI switch region, supporting the suggestion that electrostatic repulsion is an aspect underlying the mechanism of desensitization. Ser84 (replacing the unique Cys84 in cTnC reported to make a reversible covalent bond with levosimendan) also contacts W7.

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