6MOP image
Deposition Date 2018-10-04
Release Date 2019-01-09
Last Version Date 2024-10-16
Entry Detail
PDB ID:
6MOP
Title:
Crystal Structure of the All-trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E Mutant of Human Cellular Retinoic Acid Binding Protein II in the Dark at 1.9 Angstrom Resolution
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cellular retinoic acid-binding protein 2
Gene (Uniprot):CRABP2
Mutations:R111K, Y134F, T54V, R132Q, P39Y, R59Y, L121E
Chain IDs:A
Chain Length:137
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Mimicking Microbial Rhodopsin Isomerization in a Single Crystal.
J. Am. Chem. Soc. 141 1735 1741 (2019)
PMID: 30580520 DOI: 10.1021/jacs.8b12493

Abstact

Bacteriorhodopsin represents the simplest, and possibly most abundant, phototropic system requiring only a retinal-bound transmembrane protein to convert photons of light to an energy-generating proton gradient. The creation and interrogation of a microbial rhodopsin mimic, based on an orthogonal protein system, would illuminate the design elements required to generate new photoactive proteins with novel function. We describe a microbial rhodopsin mimic, created using a small soluble protein as a template, that specifically photoisomerizes all- trans to 13- cis retinal followed by thermal relaxation to the all- trans isomer, mimicking the bacteriorhodopsin photocycle, in a single crystal. The key element for selective isomerization is a tuned steric interaction between the chromophore and protein, similar to that seen in the microbial rhodopsins. It is further demonstrated that a single mutation converts the system to a protein photoswitch without chromophore photoisomerization or conformational change.

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