6MN6 image
Deposition Date 2018-10-01
Release Date 2019-10-09
Last Version Date 2023-10-11
Entry Detail
PDB ID:
6MN6
Keywords:
Title:
Crystal structure of the cytosolic domain of human CNNM3
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.36 Å
R-Value Free:
0.26
R-Value Work:
0.21
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Metal transporter CNNM3
Gene (Uniprot):CNNM3
Chain IDs:A, B
Chain Length:365
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Mg2+-ATP Sensing in CNNM, a Putative Magnesium Transporter.
Structure 28 324 335.e4 (2020)
PMID: 31864811 DOI: 10.1016/j.str.2019.11.016

Abstact

The family of cystathionine-β-synthase (CBS)-pair domain divalent metal cation transport mediators (CNNMs) is composed of four integral membrane proteins associated with Mg2+ transport. Structurally, CNNMs contain large cytosolic regions composed of a CBS-pair and a cyclic nucleotide-binding homology (CNBH) domain. How these regulate Mg2+ transport activity is unknown. Here, we determined the crystal structures of cytosolic fragments in two conformations: Mg2+-ATP-analog bound and ligand free. The structures reveal open and closed conformations with functionally important contacts not observed in structures of the individual domains. We also identified a second Mg2+-binding region in the CBS-pair domain and a different dimerization interface for the CNBH domain. Analytical ultracentrifugation and isothermal titration calorimetry experiments revealed a tight correlation between Mg2+-ATP binding and protein dimerization. Mutations that blocked either function prevented cellular Mg2+ efflux activity. The results suggest Mg2+ efflux is regulated by conformational changes associated with Mg2+-ATP binding to CNNM CBS-pair domains.

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Primary Citation of related structures