6MIG image
Deposition Date 2018-09-19
Release Date 2019-02-27
Last Version Date 2024-03-13
Entry Detail
PDB ID:
6MIG
Keywords:
Title:
Crystal structure of host-guest complex with PB hachimoji DNA
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Gag-Pol polyprotein
Gene (Uniprot):gag-pol
Chain IDs:A
Chain Length:259
Number of Molecules:1
Biological Source:Moloney murine leukemia virus (isolate Shinnick)
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*CP*TP*TP*AP*TP*(1WA)P*(1WA)P*(DS))-3')
Chain IDs:B
Chain Length:8
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*(DB)P*(1W5)P*(1W5)P*AP*TP*AP*AP*G)-3')
Chain IDs:C (auth: G)
Chain Length:8
Number of Molecules:1
Biological Source:synthetic construct
Primary Citation
Hachimoji DNA and RNA: A genetic system with eight building blocks.
Science 363 884 887 (2019)
PMID: 30792304 DOI: 10.1126/science.aat0971

Abstact

We report DNA- and RNA-like systems built from eight nucleotide "letters" (hence the name "hachimoji") that form four orthogonal pairs. These synthetic systems meet the structural requirements needed to support Darwinian evolution, including a polyelectrolyte backbone, predictable thermodynamic stability, and stereoregular building blocks that fit a Schrödinger aperiodic crystal. Measured thermodynamic parameters predict the stability of hachimoji duplexes, allowing hachimoji DNA to increase the information density of natural terran DNA. Three crystal structures show that the synthetic building blocks do not perturb the aperiodic crystal seen in the DNA double helix. Hachimoji DNA was then transcribed to give hachimoji RNA in the form of a functioning fluorescent hachimoji aptamer. These results expand the scope of molecular structures that might support life, including life throughout the cosmos.

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