6MB3 image
Deposition Date 2018-08-29
Release Date 2018-10-31
Last Version Date 2024-10-23
Entry Detail
PDB ID:
6MB3
Keywords:
Title:
Cryo-EM structure of the circumsporozoite protein of Plasmodium falciparum with a vaccine-elicited antibody reveals maturation of inter-antibody contacts
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.37 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Plasmodium falciparum recombinant shortened CSP
Chain IDs:A (auth: E)
Chain Length:278
Number of Molecules:1
Biological Source:Plasmodium falciparum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Fab311 heavy chain
Chain IDs:B (auth: H), D (auth: A), F (auth: B), H (auth: C), J (auth: D), L (auth: F), N (auth: G), P (auth: I), R (auth: J)
Chain Length:225
Number of Molecules:9
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Fab311 light chain
Chain IDs:C (auth: L), E (auth: K), G (auth: M), I (auth: N), K (auth: O), M (auth: P), O (auth: Q), Q (auth: R), S
Chain Length:218
Number of Molecules:9
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Cryo-EM structure ofP. falciparumcircumsporozoite protein with a vaccine-elicited antibody is stabilized by somatically mutated inter-Fab contacts.
Sci Adv 4 eaau8529 eaau8529 (2018)
PMID: 30324137 DOI: 10.1126/sciadv.aau8529

Abstact

The circumsporozoite protein (CSP) on the surface of Plasmodium falciparum sporozoites is important for parasite development, motility, and host hepatocyte invasion. However, intrinsic disorder of the NANP repeat sequence in the central region of CSP has hindered its structural and functional characterization. Here, the cryo-electron microscopy structure at ~3.4-Å resolution of a recombinant shortened CSP construct with the variable domains (Fabs) of a highly protective monoclonal antibody reveals an extended spiral conformation of the central NANP repeat region surrounded by antibodies. This unusual structure appears to be stabilized and/or induced by interaction with an antibody where contacts between adjacent Fabs are somatically mutated and enhance the interaction. This maturation in non-antigen contact residues may be an effective mechanism for antibodies to target tandem repeat sequences and provide novel insights into malaria vaccine design.

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Disease

Primary Citation of related structures