6MAT image
Entry Detail
PDB ID:
6MAT
EMDB ID:
Title:
Cryo-EM structure of the essential ribosome assembly AAA-ATPase Rix7
Biological Source:
PDB Version:
Deposition Date:
2018-08-28
Release Date:
2019-02-06
Method Details:
Experimental Method:
Resolution:
4.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Rix7 mutant
Mutations:E303Q/E602Q
Chain IDs:A, B, C, D, E, F
Chain Length:813
Number of Molecules:6
Biological Source:Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Polymer Type:polypeptide(L)
Description:unknown protein
Chain IDs:G
Chain Length:27
Number of Molecules:1
Biological Source:Chaetomium thermophilum var. thermophilum DSM 1495
Ligand Molecules
Primary Citation
Cryo-EM structure of the essential ribosome assembly AAA-ATPase Rix7.
Nat Commun 10 513 513 (2019)
PMID: 30705282 DOI: 10.1038/s41467-019-08373-0

Abstact

Rix7 is an essential type II AAA-ATPase required for the formation of the large ribosomal subunit. Rix7 has been proposed to utilize the power of ATP hydrolysis to drive the removal of assembly factors from pre-60S particles, but the mechanism of release is unknown. Rix7's mammalian homolog, NVL2 has been linked to cancer and mental illness disorders, highlighting the need to understand the molecular mechanisms of this essential machine. Here we report the cryo-EM reconstruction of the tandem AAA domains of Rix7 which form an asymmetric stacked homohexameric ring. We trapped Rix7 with a polypeptide in the central channel, revealing Rix7's role as a molecular unfoldase. The structure establishes that type II AAA-ATPases lacking the aromatic-hydrophobic motif within the first AAA domain can engage a substrate throughout the entire central channel. The structure also reveals that Rix7 contains unique post-α7 insertions within both AAA domains important for Rix7 function.

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Primary Citation of related structures