6M8R image
Deposition Date 2018-08-22
Release Date 2019-02-27
Last Version Date 2023-10-11
Entry Detail
PDB ID:
6M8R
Keywords:
Title:
Crystal structure of the KCTD16 BTB domain in complex with GABAB2 peptide
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:BTB/POZ domain-containing protein KCTD16
Gene (Uniprot):KCTD16
Chain IDs:A (auth: G), B (auth: H), C (auth: I), D (auth: J), E (auth: B), F (auth: C), G (auth: D), H (auth: E), I (auth: A), J (auth: F)
Chain Length:103
Number of Molecules:10
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Gamma-aminobutyric acid type B receptor subunit 2
Gene (Uniprot):GABBR2
Chain IDs:K, L
Chain Length:41
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural basis for KCTD-mediated rapid desensitization of GABABsignalling.
Nature 567 127 131 (2019)
PMID: 30814734 DOI: 10.1038/s41586-019-0990-0

Abstact

The GABAB (γ-aminobutyric acid type B) receptor is one of the principal inhibitory neurotransmitter receptors in the brain, and it signals through heterotrimeric G proteins to activate a variety of effectors, including G-protein-coupled inwardly rectifying potassium channels (GIRKs)1,2. GABAB-receptor signalling is tightly regulated by auxiliary subunits called KCTDs, which control the kinetics of GIRK activation and desensitization3-5. However, the mechanistic basis for KCTD modulation of GABAB signalling remains incompletely understood. Here, using a combination of X-ray crystallography, electron microscopy, and functional and biochemical experiments, we reveal the molecular details of KCTD binding to both GABAB receptors and G-protein βγ subunits. KCTDs associate with the receptor by forming an asymmetric pentameric ring around a region of the receptor carboxy-terminal tail, while a second KCTD domain, H1, engages in a symmetric interaction with five copies of Gβγ in which the G-protein subunits also interact directly with one another. We further show that KCTD binding to Gβγ is highly cooperative, defining a model in which KCTD proteins cooperatively strip G proteins from GIRK channels to induce rapid desensitization following receptor activation. These results provide a framework for understanding the molecular basis for the precise temporal control of GABAB signalling by KCTD proteins.

Legend

Protein

Chemical

Disease

Primary Citation of related structures