6M6L image
Deposition Date 2020-03-15
Release Date 2021-03-17
Last Version Date 2023-11-29
Entry Detail
PDB ID:
6M6L
Keywords:
HYDROLASE
Title:
The crystal structure of glycosidase hydrolyzing Notoginsenoside
Biological Source:
Source Organism:
Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) (Taxon ID: 479435)
Host Organism:
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.50 Å
R-Value Free:
0.17
R-Value Work:
0.14
R-Value Observed:
0.15
Space Group:
P 1 21 1
6M6L validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-glucosidase
Gene (Uniprot):Kfla_5268
Chain IDs:A, B
Chain Length:447
Number of Molecules:2
Biological Source:Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)
UniProt ID:D2PL27 Pfam ID:PF00232
Ligand Molecules
EDO
GOL
XYP
Primary Citation
Characterization and Structural Elucidation of Enhanced Catalytic Activity upon Engineering Glycosidase KfGH01 for the Production of Vina-ginsenoside R7
To Be Published ? ? ? (?)
Primary Citation of related structures
6M6L