6M63 image
Deposition Date 2020-03-12
Release Date 2021-09-22
Last Version Date 2024-11-06
Entry Detail
PDB ID:
6M63
Title:
Crystal structure of a cAMP sensor G-Flamp1.
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chimera of Cyclic nucleotide-gated potassium channel mll3241 and Yellow fluorescent protein
Gene (Uniprot):mll3241
Mutagens:D173G, S175G, D180Y, Y203V, A206K, H231L, S30R, V93I, S99V, S308V
Chain IDs:A, B
Chain Length:389
Number of Molecules:2
Biological Source:Mesorhizobium japonicum MAFF 303099, Aequorea victoria
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CRO A THR chromophore
Ligand Molecules
Primary Citation
A high-performance genetically encoded fluorescent indicator for in vivo cAMP imaging.
Nat Commun 13 5363 5363 (2022)
PMID: 36097007 DOI: 10.1038/s41467-022-32994-7

Abstact

cAMP is a key second messenger that regulates diverse cellular functions including neural plasticity. However, the spatiotemporal dynamics of intracellular cAMP in intact organisms are largely unknown due to low sensitivity and/or brightness of current genetically encoded fluorescent cAMP indicators. Here, we report the development of the new circularly permuted GFP (cpGFP)-based cAMP indicator G-Flamp1, which exhibits a large fluorescence increase (a maximum ΔF/F0 of 1100% in HEK293T cells), decent brightness, appropriate affinity (a Kd of 2.17 μM) and fast response kinetics (an association and dissociation half-time of 0.20 and 0.087 s, respectively). Furthermore, the crystal structure of the cAMP-bound G-Flamp1 reveals one linker connecting the cAMP-binding domain to cpGFP adopts a distorted β-strand conformation that may serve as a fluorescence modulation switch. We demonstrate that G-Flamp1 enables sensitive monitoring of endogenous cAMP signals in brain regions that are implicated in learning and motor control in living organisms such as fruit flies and mice.

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Primary Citation of related structures