6M0K image
Entry Detail
PDB ID:
6M0K
Keywords:
Title:
The crystal structure of COVID-19 main protease in complex with an inhibitor 11b
Biological Source:
PDB Version:
Deposition Date:
2020-02-22
Release Date:
2020-04-29
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:3C-like proteinase
Chain IDs:A
Chain Length:304
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2
Peptide-like Molecules
PRD_002349
Primary Citation
Structure-based design of antiviral drug candidates targeting the SARS-CoV-2 main protease.
Science 368 1331 1335 (2020)
PMID: 32321856 DOI: 10.1126/science.abb4489

Abstact

SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) is the etiological agent responsible for the global COVID-19 (coronavirus disease 2019) outbreak. The main protease of SARS-CoV-2, Mpro, is a key enzyme that plays a pivotal role in mediating viral replication and transcription. We designed and synthesized two lead compounds (11a and 11b) targeting Mpro Both exhibited excellent inhibitory activity and potent anti-SARS-CoV-2 infection activity. The x-ray crystal structures of SARS-CoV-2 Mpro in complex with 11a or 11b, both determined at a resolution of 1.5 angstroms, showed that the aldehyde groups of 11a and 11b are covalently bound to cysteine 145 of Mpro Both compounds showed good pharmacokinetic properties in vivo, and 11a also exhibited low toxicity, which suggests that these compounds are promising drug candidates.

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Primary Citation of related structures