6LK4 image
Deposition Date 2019-12-18
Release Date 2020-03-18
Last Version Date 2023-11-22
Entry Detail
PDB ID:
6LK4
Keywords:
Title:
Crystal structure of GMP reductase from Trypanosoma brucei in complex with guanosine 5'-triphosphate
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
I 4 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Guanosine 5'-monophosphate Reductase
Gene (Uniprot):Tb05.1P6.110
Chain IDs:A
Chain Length:504
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei
Primary Citation
Allosteric regulation accompanied by oligomeric state changes of Trypanosoma brucei GMP reductase through cystathionine-beta-synthase domain.
Nat Commun 11 1837 1837 (2020)
PMID: 32296055 DOI: 10.1038/s41467-020-15611-3

Abstact

Guanosine 5'-monophosphate reductase (GMPR) is involved in the purine salvage pathway and is conserved throughout evolution. Nonetheless, the GMPR of Trypanosoma brucei (TbGMPR) includes a unique structure known as the cystathionine-β-synthase (CBS) domain, though the role of this domain is not fully understood. Here, we show that guanine and adenine nucleotides exert positive and negative effects, respectively, on TbGMPR activity by binding allosterically to the CBS domain. The present structural analyses revealed that TbGMPR forms an octamer that shows a transition between relaxed and twisted conformations in the absence and presence of guanine nucleotides, respectively, whereas the TbGMPR octamer dissociates into two tetramers when ATP is available instead of guanine nucleotides. These findings demonstrate that the CBS domain plays a key role in the allosteric regulation of TbGMPR by facilitating the transition of its oligomeric state depending on ligand nucleotide availability.

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