6LF9 image
Deposition Date 2019-11-30
Release Date 2021-03-17
Last Version Date 2024-11-20
Entry Detail
PDB ID:
6LF9
Keywords:
STRUCTURAL PROTEIN
Title:
Crystal structure of pSLA-1*1301 complex with dodecapeptide RVEDVTNTAEYW
Biological Source:
Source Organism:
Sus scrofa (Taxon ID: 9823)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.50 Å
R-Value Free:
0.29
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 1 21 1
6LF9 validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MHC class I antigen
Chain IDs:A (auth: D), D (auth: A), G, J
Chain Length:273
Number of Molecules:4
Biological Source:Sus scrofa
UniProt ID:B1PJU7 Pfam ID:PF00129, PF07654
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2M
Chain IDs:B (auth: E), E (auth: B), H, K
Chain Length:97
Number of Molecules:4
Biological Source:Sus scrofa
UniProt ID:Q07717 Pfam ID:PF07654
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ARG-VAL-GLU-ASP-VAL-THR-ASN-THR-ALA-GLU-TYR-TRP
Chain IDs:C (auth: F), F (auth: C), I, L
Chain Length:12
Number of Molecules:4
Biological Source:synthetic construct
UniProt ID:P16082
Primary Citation
Peptidomes and Structures Illustrate How SLA-I Micropolymorphism Influences the Preference of Binding Peptide Length.
Front Immunol ? ? ? (2022)
DOI: 10.3389/fimmu.2022.820881
Primary Citation of related structures
6LF9