6LEW image
Deposition Date 2019-11-27
Release Date 2020-12-02
Last Version Date 2023-11-22
Entry Detail
PDB ID:
6LEW
Keywords:
DNA BINDING PROTEIN/DNA
Title:
RVD HA specifically contacts 5mC through van der Waals interactions
Biological Source:
Source Organism:
Xanthomonas campestris pv. armoraciae (Taxon ID: 329463)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.48 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 1 21 1
6LEW validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TAL effector
Chain IDs:A, D (auth: B)
Chain Length:499
Number of Molecules:2
Biological Source:Xanthomonas campestris pv. armoraciae
UniProt ID:Q3ZD72 Pfam ID:PF03377
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*CP*GP*TP*CP*TP*CP*T)-3')
Chain IDs:B (auth: I), E (auth: C)
Chain Length:17
Number of Molecules:2
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3')
Chain IDs:C (auth: J), F (auth: D)
Chain Length:17
Number of Molecules:2
Biological Source:synthetic construct
Primary Citation
RVD HA specifically contacts 5mC through van der Waals interactions
To Be Published ? ? ? (?)
Primary Citation of related structures
6LEW