6LE9 image
Deposition Date 2019-11-24
Release Date 2020-04-22
Last Version Date 2023-11-22
Entry Detail
PDB ID:
6LE9
Keywords:
DNA BINDING PROTEIN/DNA
Title:
The Human Telomeric Nucleosome Displays Distinct Structural and Dynamic Properties
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.60 Å
R-Value Free:
0.28
R-Value Work:
0.23
R-Value Observed:
0.24
Space Group:
P 21 21 21
6LE9 validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H3.1
Gene (Uniprot):H3C1, H3C2, H3C3, H3C4, H3C6, H3C7, H3C8, H3C10, H3C11, H3C12
Chain IDs:A, E
Chain Length:96
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P68431 Pfam ID:PF00125
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H4
Gene (Uniprot):H4C1, H4C2, H4C3, H4C4, H4C5, H4C6, H4C8, H4C9, H4C11, H4C12, H4C13, H4C14, H4C15, H4C16
Chain IDs:B, F
Chain Length:87
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P62805 Pfam ID:PF15511
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H2A type 1-B/E
Gene (Uniprot):H2AC4, H2AC8
Chain IDs:C, G
Chain Length:105
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P04908 Pfam ID:PF00125, PF16211
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H2B type 1-K
Gene (Uniprot):H2BC12
Chain IDs:D, H
Chain Length:95
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:O60814 Pfam ID:PF00125
Polymer Type:polydeoxyribonucleotide
Molecule:Human Telomeric DNA (145-MER)
Chain IDs:I
Chain Length:145
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polydeoxyribonucleotide
Molecule:Human Telomeric DNA (145-MER)
Chain IDs:J
Chain Length:145
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
MN
Primary Citation
The human telomeric nucleosome displays distinct structural and dynamic properties.
Nucleic Acids Res. 48 5383 5396 (2020)
PMID: 32374876 DOI: 10.1093/nar/gkaa289
Primary Citation of related structures
6LE9