6LBX image
Deposition Date 2019-11-15
Release Date 2020-11-18
Last Version Date 2024-10-23
Entry Detail
PDB ID:
6LBX
Keywords:
PROTEIN BINDING
Title:
Crystal structure of HER2 Domain IV and Rb-H2
Biological Source:
Source Organism:
Cyclostomata (Taxon ID: 1476529)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.03 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
6LBX validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Repebody (Rb-H2)
Chain IDs:A
Chain Length:275
Number of Molecules:1
Biological Source:Cyclostomata
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Receptor tyrosine-protein kinase erbB-2
Gene (Uniprot):ERBB2
Chain IDs:B
Chain Length:97
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P04626 Pfam ID:PF14843 EC:2.7.10.1
Ligand Molecules
NAG
Primary Citation
Computationally-guided design and affinity improvement of a protein binder targeting a specific site on HER2
Comput Struct Biotechnol J 19 1325 1334 (2021)
DOI: 10.1016/j.csbj.2021.02.013
Primary Citation of related structures
6LBX