6L5R image
Entry Detail
PDB ID:
6L5R
Keywords:
Title:
crystal structure of GgCGT in complex with UDP-Glu
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-10-24
Release Date:
2020-02-19
Method Details:
Experimental Method:
Resolution:
2.89 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:GgCGT
Chain IDs:A
Chain Length:474
Number of Molecules:1
Biological Source:Glycyrrhiza glabra
Primary Citation
Functional Characterization and Structural Basis of an Efficient Di-C-glycosyltransferase fromGlycyrrhiza glabra.
J.Am.Chem.Soc. 142 3506 3512 (2020)
PMID: 31986016 DOI: 10.1021/jacs.9b12211

Abstact

A highly efficient di-C-glycosyltransferase GgCGT was discovered from the medicinal plant Glycyrrhiza glabra. GgCGT catalyzes a two-step di-C-glycosylation of flopropione-containing substrates with conversion rates of >98%. To elucidate the catalytic mechanisms of GgCGT, we solved its crystal structures in complex with UDP-Glc, UDP-Gal, UDP/phloretin, and UDP/nothofagin, respectively. Structural analysis revealed that the sugar donor selectivity was controlled by the hydrogen-bond interactions of sugar hydroxyl groups with D390 and other key residues. The di-C-glycosylation capability of GgCGT was attributed to a spacious substrate-binding tunnel, and the G389K mutation could switch di- to mono-C-glycosylation. GgCGT is the first di-C-glycosyltransferase with a crystal structure, and the first C-glycosyltransferase with a complex structure containing a sugar acceptor. This work could benefit the development of efficient biocatalysts to synthesize C-glycosides with medicinal potential.

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