ISDA

Deposition Date 2019-10-15

Release Date 2021-05-19

Last Version Date 2024-11-06

Entry Detail

PDB ID:

6L3Y

Keywords:

PROTEIN BINDING/INHIBITOR

Title:

Crystal Structure of Lysyl-tRNA Synthetase from Plasmodium falciparum complexed with L-lysine and Clado-C

Biological Source:

Source Organism:

Plasmodium falciparum 3D7 (Taxon ID: 36329)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

3.10 Å

R-Value Free:

0.27

R-Value Work:

0.22

R-Value Observed:

0.22

Space Group:

P 21 21 2

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Lysine--tRNA ligase
Gene (Uniprot):PF3D7_1350100
Chain IDs:A (auth: B), B (auth: A)
Chain Length:507
Number of Molecules:2
Biological Source:Plasmodium falciparum 3D7

UniProt ID:Q8IDJ8 Pfam ID:PF01336, PF00152 EC:6.1.1.6

Ligand Molecules

E5C

LYS

PO4

Primary Citation

Crystal Structure of Lysyl-tRNA Synthetase from Plasmodium falciparum complexed with L-lysine and Cladosporin inhibitor, Cla-B

Babbar, P, Sato, M, Manickam, Y, Mishra, S, Harlos, K, Gupta, S, Parvez, S, Kikuchi, H, Sharma, A, Khan, S, Sharma, A, Belrhali, H, Yogavel, M, Sharma, A.Show

Chembiochem ? ? ? (2021)

DOI: 10.1002/cbic.202100212

Primary Citation of related structures