6L35 image
Deposition Date 2019-10-09
Release Date 2021-02-10
Last Version Date 2025-09-17
Entry Detail
PDB ID:
6L35
Title:
PSI-LHCI Supercomplex from Physcometrella patens
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.23 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein, chloroplastic
Gene (Uniprot):LOC112287759
Chain IDs:N (auth: 2)
Chain Length:210
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein, chloroplastic
Chain IDs:P (auth: 3)
Chain Length:213
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein, chloroplastic
Gene (Uniprot):LOC112281033
Chain IDs:Q (auth: 5)
Chain Length:205
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein, chloroplastic
Chain IDs:O (auth: 6)
Chain Length:192
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyll a apoprotein A1
Gene (Uniprot):psaA
Chain IDs:A
Chain Length:742
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyll a apoprotein A2
Gene (Uniprot):psaB
Chain IDs:B
Chain Length:733
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I iron-sulfur center
Gene (Uniprot):psaC
Chain IDs:C
Chain Length:80
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Predicted protein PsaD
Chain IDs:D
Chain Length:141
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PsaE
Gene (Uniprot):LOC112275967
Chain IDs:E
Chain Length:62
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PSI-F
Gene (Uniprot):LOC112295343
Chain IDs:F
Chain Length:159
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Predicted protein PsaG
Chain IDs:G
Chain Length:98
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PsaH photosystem I reaction center subunit
Gene (Uniprot):LOC112286609
Chain IDs:H
Chain Length:90
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit VIII
Gene (Uniprot):psaI
Chain IDs:I
Chain Length:34
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit IX
Gene (Uniprot):psaJ
Chain IDs:J
Chain Length:41
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PsaK
Chain IDs:K
Chain Length:79
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PSI subunit V
Chain IDs:L
Chain Length:159
Number of Molecules:1
Biological Source:Physcomitrium patens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit XII
Gene (Uniprot):psaM
Chain IDs:M
Chain Length:29
Number of Molecules:1
Biological Source:Physcomitrium patens
Primary Citation
Antenna arrangement and energy-transfer pathways of PSI-LHCI from the moss Physcomitrella patens.
Cell Discov 7 10 10 (2021)
PMID: 33589616 DOI: 10.1038/s41421-021-00242-9

Abstact

Plants harvest light energy utilized for photosynthesis by light-harvesting complex I and II (LHCI and LHCII) surrounding photosystem I and II (PSI and PSII), respectively. During the evolution of green plants, moss is at an evolutionarily intermediate position from aquatic photosynthetic organisms to land plants, being the first photosynthetic organisms that landed. Here, we report the structure of the PSI-LHCI supercomplex from the moss Physcomitrella patens (Pp) at 3.23 Å resolution solved by cryo-electron microscopy. Our structure revealed that four Lhca subunits are associated with the PSI core in an order of Lhca1-Lhca5-Lhca2-Lhca3. This number is much decreased from 8 to 10, the number of subunits in most green algal PSI-LHCI, but the same as those of land plants. Although Pp PSI-LHCI has a similar structure as PSI-LHCI of land plants, it has Lhca5, instead of Lhca4, in the second position of Lhca, and several differences were found in the arrangement of chlorophylls among green algal, moss, and land plant PSI-LHCI. One chlorophyll, PsaF-Chl 305, which is found in the moss PSI-LHCI, is located at the gap region between the two middle Lhca subunits and the PSI core, and therefore may make the excitation energy transfer from LHCI to the core more efficient than that of land plants. On the other hand, energy-transfer paths at the two side Lhca subunits are relatively conserved. These results provide a structural basis for unravelling the mechanisms of light-energy harvesting and transfer in the moss PSI-LHCI, as well as important clues on the changes of PSI-LHCI after landing.

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