6L23 image
Deposition Date 2019-10-02
Release Date 2021-03-31
Last Version Date 2023-11-22
Entry Detail
PDB ID:
6L23
Keywords:
Title:
Crystal structure of CK2a1 V116I with hematein
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.97 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Casein kinase II subunit alpha
Gene (Uniprot):CSNK2A1
Mutations:V116I
Chain IDs:A
Chain Length:340
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structural insights for producing CK2 alpha 1-specific inhibitors.
Bioorg.Med.Chem.Lett. 30 126837 126837 (2020)
PMID: 31859160 DOI: 10.1016/j.bmcl.2019.126837

Abstact

Casein kinase 2 catalytic subunit (CK2α) is classified into two subtypes CK2α1 and CK2α2. CK2α1 is a drug discovery target, whereas CK2α2 is an off-target of CK2α1 inhibitors. High amino acid sequence homology between these subtypes hampers efforts to produce ATP competitive inhibitors that are highly selective to CK2α1. Hematein was identified previously as a non-ATP-competitive inhibitor for CK2α1, whereas this compound acts as an ATP competitive CK2α2 inhibitor. Crystal structures of CK2α1 and CK2α2 in complex with hematein revealed distinct binding features that provide structural insights for producing CK2α1-selective inhibitors.

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Primary Citation of related structures