6KUU image
Deposition Date 2019-09-02
Release Date 2019-12-11
Last Version Date 2025-06-25
Entry Detail
PDB ID:
6KUU
Keywords:
VIRAL PROTEIN/RNA
Title:
Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B3)
Biological Source:
Source Organism:
Influenza D virus (D/swine/Oklahoma/1334/2011) (Taxon ID: 1173138)
synthetic construct (Taxon ID: 32630)
Host Organism:
Spodoptera aff. frugiperda 1 BOLD-2017
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
4.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
6KUU validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Polymerase 3
Gene (Uniprot):P3
Chain IDs:A
Chain Length:710
Number of Molecules:1
Biological Source:Influenza D virus (D/swine/Oklahoma/1334/2011)
UniProt ID:K9LHJ4 Pfam ID:PF00603
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RNA-directed RNA polymerase catalytic subunit
Gene (Uniprot):PB1
Chain IDs:B
Chain Length:753
Number of Molecules:1
Biological Source:Influenza D virus (D/swine/Oklahoma/1334/2011)
UniProt ID:K9LH03 Pfam ID:PF00602, PF04196
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Polymerase PB2
Gene (Uniprot):PB2
Chain IDs:C
Chain Length:772
Number of Molecules:1
Biological Source:Influenza D virus (D/swine/Oklahoma/1334/2011)
UniProt ID:K9LHF3 Pfam ID:PF20947, PF20948, PF20949, PF20950, PF00604, PF20951, PF20952
Polymer Type:polyribonucleotide
Molecule:3'-vRNA
Chain IDs:D (auth: R)
Chain Length:14
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polyribonucleotide
Molecule:5'-vRNA
Chain IDs:E (auth: V)
Chain Length:15
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
NA
Primary Citation
Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B3)
To Be Published ? ? ? (?)
Primary Citation of related structures
6KUU