6KRY image
Deposition Date 2019-08-22
Release Date 2019-12-04
Last Version Date 2024-03-27
Entry Detail
PDB ID:
6KRY
Keywords:
Title:
Structure of staphylococcal enterotoxin SEN
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Enterotoxin SEN variant
Gene (Uniprot):sen
Chain IDs:A
Chain Length:227
Number of Molecules:1
Biological Source:Staphylococcus aureus
Primary Citation
Structure of Staphylococcal Enterotoxin N: Implications for Binding Properties to Its Cellular Proteins.
Int J Mol Sci 20 ? ? (2019)
PMID: 31775346 DOI: 10.3390/ijms20235921

Abstact

Staphylococcus aureus strains produce a unique family of immunostimulatory exotoxins termed as bacterial superantigens (SAgs), which cross-link major histocompatibility complex class II (MHC II) molecule and T-cell receptor (TCR) to stimulate large numbers of T cells at extremely low concentrations. SAgs are associated with food poisoning and toxic shock syndrome. To date, 26 genetically distinct staphylococcal SAgs have been reported. This study reports the first X-ray structure of newly characterized staphylococcal enterotoxin N (SEN). SEN possesses the classical two domain architecture that includes an N-terminal oligonucleotide-binding fold and a C-terminal β-grasp domain. Amino acid and structure alignments revealed that several critical amino acids that are proposed to be responsible for MHC II and TCR molecule engagements are variable in SEN, suggesting that SEN may adopt a different binding mode to its cellular receptors. This work helps better understand the mechanisms of action of SAgs.

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