6KLJ image
Entry Detail
PDB ID:
6KLJ
Keywords:
Title:
Crystal Structure of the Zea Mays laccase 3 complexed with coniferyl
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-07-30
Release Date:
2020-01-01
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.20
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 61 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Laccase
Chain IDs:A
Chain Length:550
Number of Molecules:1
Biological Source:Zea mays
Primary Citation
Structural basis for monolignol oxidation by a maize laccase.
Nat.Plants 6 231 237 (2020)
PMID: 32123349 DOI: 10.1038/s41477-020-0595-5

Abstact

Plant laccases catalyse the oxidation of monolignols in lignification, a process reinforcing the cell wall of many different cell types that provide mechanical support, nutrient transportation and defence against pathogens in plants1. The isozymes display a broad range of substrate preferences. Here, the substrate preference of a laccase (ZmLac3) from Zea mays (maize) was characterized. The crystal structure of ZmLac3 revealed a compact and deep substrate-binding pocket, and the binding modes of sinapyl alcohol (SinA) and coniferyl alcohol (ConA) were solved. On the basis of structural data and kinetics analysis, we propose that the regionalization of polar and hydrophobic surfaces in the binding pocket of ZmLac3 is vital for defining the orientation of SinA/ConA binding. The extra methoxyl group in SinA makes substantial contributions to interactions between SinA and ZmLac3, which are absent in the ZmLac3-ConA complex. In summary, the polar and hydrophobic interactions between SinA/ConA and ZmLac3 determine the binding positions of the monolignols in ZmLac3. These results provide valuable insight about ZmLac3 catalysis and should aid industrial processes that use plant laccases.

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