6KBE image
Deposition Date 2019-06-24
Release Date 2020-06-24
Last Version Date 2024-10-23
Entry Detail
PDB ID:
6KBE
Keywords:
HYDROLASE
Title:
Structure of Deubiquitinase
Biological Source:
Source Organism:
Oryza sativa subsp. japonica (Taxon ID: 39947)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.34 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
6KBE validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ubiquitin thioesterase
Gene (Uniprot):OsJ_28104
Chain IDs:A (auth: B)
Chain Length:253
Number of Molecules:1
Biological Source:Oryza sativa subsp. japonica
UniProt ID:B9G207 Pfam ID:PF10275
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Polyubiquitin-C
Gene (Uniprot):UBC
Chain IDs:B (auth: G)
Chain Length:152
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P0CG48 Pfam ID:PF00240
Primary Citation
Met1-specific motifs conserved in OTUB subfamily of green plants enable rice OTUB1 to hydrolyse Met1 ubiquitin chains
Nat Commun 13 4672 ? (2022)
DOI: 10.1038/s41467-022-32364-3
Primary Citation of related structures
6KBE