6K5V image
Deposition Date 2019-05-31
Release Date 2020-03-18
Last Version Date 2023-11-22
Entry Detail
PDB ID:
6K5V
Keywords:
Title:
Structure of CSY4 Apo-form
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.69 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Citrate synthase 4, mitochondrial
Gene (Uniprot):CSY4
Chain IDs:A, B, C, D, E, F
Chain Length:458
Number of Molecules:6
Biological Source:Arabidopsis thaliana
Ligand Molecules
Primary Citation
Structural and biochemical characterization of mitochondrial citrate synthase 4 from Arabidopsis thaliana.
Acta Crystallogr.,Sect.F 76 109 115 (2020)
PMID: 32133996 DOI: 10.1107/S2053230X20001521

Abstact

Citrate synthase (CS) catalyzes the conversion of oxaloacetate and acetyl coenzyme A into citrate and coenzyme A in the mitochondrial tricarboxylic acid (TCA) cycle. In plants, mitochondrial metabolism, including the TCA cycle, occurs in interaction with photosynthetic metabolism. The controlled regulation of several enzymes in the TCA cycle, such as CS, is important in plants. Here, the first crystal structure of a plant mitochondrial CS, CSY4 from Arabidopsis thaliana (AtCSY4), has been determined. Structural comparison of AtCSY4 with mitochondrial CSs revealed a high level of similarity. Inhibition analysis showed a similar manner of inhibition as in mitochondrial CSs. The effect of oxidation on one of a pair of cysteine residues in AtCSY4 was speculated upon based on the folded structure.

Legend

Protein

Chemical

Disease

Primary Citation of related structures