6K3F image
Deposition Date 2019-05-18
Release Date 2020-06-10
Last Version Date 2024-11-06
Entry Detail
PDB ID:
6K3F
Title:
Crystal Structure of beta-Arrestin 2 in Complex with CXCR7 Phosphopeptide
Biological Source:
Source Organism:
Rattus norvegicus (Taxon ID: 10116)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.24
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Beta-arrestin-2
Gene (Uniprot):Arrb2
Chain IDs:A, C (auth: B), E (auth: C), G (auth: D), I (auth: E), K (auth: F)
Chain Length:377
Number of Molecules:6
Biological Source:Rattus norvegicus
Polymer Type:polypeptide(L)
Molecule:Peptide from Atypical chemokine receptor 3
Gene (Uniprot):ACKR3
Chain IDs:B (auth: U), D (auth: V), F (auth: W), H (auth: X), J (auth: Y), L (auth: Z)
Chain Length:15
Number of Molecules:6
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
SEP B SER modified residue
TPO B THR modified residue
Primary Citation
Crystal Structure of beta-Arrestin 2 in Complex with CXCR7 Phosphopeptide.
Structure 28 1014 1023.e4 (2020)
PMID: 32579945 DOI: 10.1016/j.str.2020.06.002

Abstact

β-Arrestins (βarrs) critically regulate G-protein-coupled receptor (GPCR) signaling and trafficking. βarrs have two isoforms, βarr1 and βarr2. Receptor phosphorylation is a key determinant for the binding of βarrs, and understanding the intricate details of receptor-βarr interaction is the next frontier in GPCR structural biology. The high-resolution structure of active βarr1 in complex with a phosphopeptide derived from GPCR has been revealed, but that of βarr2 remains elusive. Here, we present a 2.3-Å crystal structure of βarr2 in complex with a phosphopeptide (C7pp) derived from the carboxyl terminus of CXCR7. The structural analysis of C7pp-bound βarr2 reveals key differences from the previously determined active conformation of βarr1. One of the key differences is that C7pp-bound βarr2 shows a relatively small inter-domain rotation. Antibody-fragment-based conformational sensor and hydrogen/deuterium exchange experiments further corroborated the structural features of βarr2 and suggested that βarr2 adopts a range of inter-domain rotations.

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Primary Citation of related structures