6K33 image
Deposition Date 2019-05-16
Release Date 2020-05-20
Last Version Date 2024-10-16
Entry Detail
PDB ID:
6K33
Keywords:
Title:
Structure of PSI-isiA supercomplex from Thermosynechococcus vulcanus
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.74 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Iron stress in-duced protein A
Chain IDs:M (auth: a1), N (auth: a2), O (auth: a3), P (auth: a4), Q (auth: a5), R (auth: a6), EA (auth: b1), FA (auth: b2), GA (auth: b3), HA (auth: b4), IA (auth: b5), JA (auth: b6), WA (auth: c1), XA (auth: c2), YA (auth: c3), ZA (auth: c4), AB (auth: c5), BB (auth: c6)
Chain Length:358
Number of Molecules:18
Biological Source:Thermosynechococcus vulcanus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyll a apoprotein A1
Gene (Uniprot):psaA
Chain IDs:A (auth: aA), S (auth: bA), KA (auth: cA)
Chain Length:755
Number of Molecules:3
Biological Source:Thermosynechococcus vulcanus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyll a apoprotein A2
Gene (Uniprot):psaB
Chain IDs:B (auth: aB), T (auth: bB), LA (auth: cB)
Chain Length:740
Number of Molecules:3
Biological Source:Thermosynechococcus vulcanus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I iron-sulfur center
Gene (Uniprot):psaC
Chain IDs:C (auth: aC), U (auth: bC), MA (auth: cC)
Chain Length:80
Number of Molecules:3
Biological Source:Thermosynechococcus vulcanus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit II
Gene (Uniprot):psaD
Chain IDs:D (auth: aD), V (auth: bD), NA (auth: cD)
Chain Length:138
Number of Molecules:3
Biological Source:Thermosynechococcus vulcanus
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit IV
Chain IDs:E (auth: aE), W (auth: bE), OA (auth: cE)
Chain Length:75
Number of Molecules:3
Biological Source:Thermosynechococcus vulcanus
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit III
Chain IDs:F (auth: aF), X (auth: bF), PA (auth: cF)
Chain Length:164
Number of Molecules:3
Biological Source:Thermosynechococcus vulcanus
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit VIII
Chain IDs:G (auth: aI), Y (auth: bI), QA (auth: cI)
Chain Length:38
Number of Molecules:3
Biological Source:Thermosynechococcus vulcanus
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit IX
Chain IDs:H (auth: aJ), Z (auth: bJ), RA (auth: cJ)
Chain Length:41
Number of Molecules:3
Biological Source:Thermosynechococcus vulcanus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit PsaK
Gene (Uniprot):psaK
Chain IDs:I (auth: aK), AA (auth: bK), SA (auth: cK)
Chain Length:85
Number of Molecules:3
Biological Source:Thermosynechococcus vulcanus
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit XI
Chain IDs:J (auth: aL), BA (auth: bL), TA (auth: cL)
Chain Length:154
Number of Molecules:3
Biological Source:Thermosynechococcus vulcanus
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit XII
Chain IDs:K (auth: aM), CA (auth: bM), UA (auth: cM)
Chain Length:31
Number of Molecules:3
Biological Source:Thermosynechococcus vulcanus
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit psaX
Chain IDs:L (auth: aX), DA (auth: bX), VA (auth: cX)
Chain Length:35
Number of Molecules:3
Biological Source:Thermosynechococcus vulcanus
Primary Citation
Structure of a cyanobacterial photosystem I surrounded by octadecameric IsiA antenna proteins.
Commun Biol 3 232 232 (2020)
PMID: 32393811 DOI: 10.1038/s42003-020-0949-6

Abstact

Iron-stress induced protein A (IsiA) is a chlorophyll-binding membrane-spanning protein in photosynthetic prokaryote cyanobacteria, and is associated with photosystem I (PSI) trimer cores, but its structural and functional significance in light harvesting remains unclear. Here we report a 2.7-Å resolution cryo-electron microscopic structure of a supercomplex between PSI core trimer and IsiA from a thermophilic cyanobacterium Thermosynechococcus vulcanus. The structure showed that 18 IsiA subunits form a closed ring surrounding a PSI trimer core. Detailed arrangement of pigments within the supercomplex, as well as molecular interactions between PSI and IsiA and among IsiAs, were resolved. Time-resolved fluorescence spectra of the PSI-IsiA supercomplex showed clear excitation-energy transfer from IsiA to PSI, strongly indicating that IsiA functions as an energy donor, but not an energy quencher, in the supercomplex. These structural and spectroscopic findings provide important insights into the excitation-energy-transfer and subunit assembly mechanisms in the PSI-IsiA supercomplex.

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