6K1T image
Deposition Date 2019-05-12
Release Date 2020-04-15
Last Version Date 2024-03-06
Entry Detail
PDB ID:
6K1T
Keywords:
Title:
The structure of Francisella virulence factor BioJ
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.58 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Alpha/beta hydrolase fold family protein
Chain IDs:A
Chain Length:306
Number of Molecules:1
Biological Source:Francisella philomiragia subsp. philomiragia ATCC 25015
Primary Citation
Molecular Basis of BioJ, a Unique Gatekeeper in Bacterial Biotin Synthesis.
Iscience 19 796 808 (2019)
PMID: 31494495 DOI: 10.1016/j.isci.2019.08.028

Abstact

Biotin is an indispensable cofactor in the three domains of life. The unusual virulence factor BioJ of Francisella catalyzes the formation of pimeloyl-ACP, an intermediate in biotin synthesis. Here, we report the 1.58 Å crystal structure of BioJ, the enzymatic activity of which is determined with the in vitro reconstituted reaction and biotin bioassay in vivo. Unlike the paradigm BioH, BioJ displays an atypical α/β-hydrolase fold. A structurally conserved catalytic triad (S151, D248, and H278) of BioJ is functionally defined. A proposed model for BioJ catalysis involves two basic residues-rich cavities, of which cavity-1, rather than cavity-2, binds to the ACP moiety of its physiological substrate, pimeloyl-ACP methyl ester. In summary, this finding provides molecular insights into the BioJ gatekeeper of biotin synthesis.

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