6JZB image
Deposition Date 2019-04-30
Release Date 2020-11-04
Last Version Date 2024-03-27
Entry Detail
PDB ID:
6JZB
Title:
Structural characterization of DnaJ from Streptococcus pneumonia presents a new tetramer of Hsp40 family
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.75 Å
R-Value Free:
0.28
R-Value Work:
0.24
R-Value Observed:
0.25
Space Group:
I 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Chaperone protein DnaJ
Gene (Uniprot):dnaJ
Chain IDs:A
Chain Length:385
Number of Molecules:1
Biological Source:Streptococcus pneumoniae
Primary Citation
Structural insights into the formation of oligomeric state by a type I Hsp40 chaperone.
Biochimie 176 45 51 (2020)
PMID: 32621942 DOI: 10.1016/j.biochi.2020.06.009

Abstact

Molecular chaperones can prevent and repair protein misfolding and aggregation to maintain protein homeostasis in cells. Hsp40 chaperones interact with unfolded client proteins via the dynamic multivalent interaction (DMI) mechanism with their multiple client-binding sites. Here we report that a type I Hsp40 chaperone from Streptococcus pneumonia (spHsp40) forms a concentration-independent polydispersity oligomer state in solution. The crystal structure of spHsp40 determined at 2.75 Å revealed that each monomer has a type I Hsp40 structural fold containing a zinc finger domain and C-terminal domains I and II (CTD I and CTD II). Subsequent quaternary structure analysis using a PISA server generated two dimeric models. The interface mutational analysis suggests the conserved C-terminal dimeric motif as a basis for dimer formation and that the novel dimeric interaction between a client-binding site in CTD I and the zinc finger domain promotes the formation of the spHsp40 oligomeric state. In vitro functional analysis demonstrated that spHsp40 oligomer is fully active and possess the optimal activity in stimulating the ATPase activity of spHsp70. The oligomer state of type I Hsp40 and its formation might be important in understanding Hsp40 function and its interaction with client proteins.

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