6JY5 image
Deposition Date 2019-04-26
Release Date 2019-06-26
Last Version Date 2023-11-22
Entry Detail
PDB ID:
6JY5
Title:
Structure of CsoS4B from Halothiobacillus neapolitanus
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.15 Å
R-Value Free:
0.22
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Unidentified carboxysome polypeptide
Gene (Uniprot):csoS4B
Chain IDs:A (auth: D), B (auth: A), C (auth: B), D (auth: C), E
Chain Length:85
Number of Molecules:5
Biological Source:Halothiobacillus neapolitanus
Primary Citation
Crystal structure of pentameric shell protein CsoS4B of Halothiobacillus neapolitanus alpha-carboxysome.
Biochem.Biophys.Res.Commun. 515 510 515 (2019)
PMID: 31171360 DOI: 10.1016/j.bbrc.2019.05.047

Abstact

Carboxysome, encapsulating an enzymatic core within an icosahedral-shaped semipermeable protein shell, could enhance CO2 fixation under low CO2 conditions in the environment. The shell of Halothiobacillus neapolitanus α-carboxysome possesses two 38% sequence-identical pentameric proteins, namely CsoS4A and CsoS4B. However, the functions of two paralogous pentameric proteins in α-carboxysome assembly remain unknown. Here we report the crystal structure of CsoS4B at 2.15 Å resolution. It displays as a stable pentamer, each subunit of which consists of a β-barrel core domain, in addition to an insertion of helix α1 that forms the central pore. Structural comparisons and multiple-sequence alignment strongly indicate that CsoS4A and CsoS4B differ from each other in interacting with various components of α-carboxysome, despite they share a similar overall structure. These findings provide the structural basis for further investigations on the self-assembly process of carboxysome.

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