6JSJ image
Deposition Date 2019-04-08
Release Date 2020-02-19
Last Version Date 2024-11-20
Entry Detail
PDB ID:
6JSJ
Keywords:
Title:
Structural analysis of a trimeric assembly of the mitochondrial dynamin-like GTPase Mgm1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.30
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 41 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynamin-like GTPase MGM1, mitochondrial
Gene (Uniprot):MGM1
Chain IDs:A, B, C
Chain Length:698
Number of Molecules:3
Biological Source:Saccharomyces cerevisiae S288c
Primary Citation
Structural analysis of a trimeric assembly of the mitochondrial dynamin-like GTPase Mgm1.
Proc.Natl.Acad.Sci.USA 117 4061 4070 (2020)
PMID: 32041880 DOI: 10.1073/pnas.1919116117

Abstact

The fusion of inner mitochondrial membranes requires dynamin-like GTPases, Mgm1 in yeast and OPA1 in mammals, but how they mediate membrane fusion is poorly understood. Here, we determined the crystal structure of Saccharomyces cerevisiae short Mgm1 (s-Mgm1) in complex with GDP. It revealed an N-terminal GTPase (G) domain followed by two helix bundles (HB1 and HB2) and a unique C-terminal lipid-interacting stalk (LIS). Dimers can form through antiparallel HB interactions. Head-to-tail trimers are built by intermolecular interactions between the G domain and HB2-LIS. Biochemical and in vivo analyses support the idea that the assembly interfaces observed here are native and critical for Mgm1 function. We also found that s-Mgm1 interacts with negatively charged lipids via both the G domain and LIS. Based on these observations, we propose that membrane targeting via the G domain and LIS facilitates the in cis assembly of Mgm1, potentially generating a highly curved membrane tip to allow inner membrane fusion.

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