6JMN image
Deposition Date 2019-03-12
Release Date 2020-05-06
Last Version Date 2024-10-16
Entry Detail
PDB ID:
6JMN
Keywords:
Title:
Crystal structure of Ostrinia furnacalis Chitinase h complexed with compound 2-8-s2
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 2 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Chitinase
Gene (Uniprot):OfChi-h
Chain IDs:A
Chain Length:553
Number of Molecules:1
Biological Source:Ostrinia furnacalis
Primary Citation
A Series of Compounds Bearing a Dipyrido-Pyrimidine Scaffold Acting as Novel Human and Insect Pest Chitinase Inhibitors.
J.Med.Chem. 63 987 1001 (2020)
PMID: 31928006 DOI: 10.1021/acs.jmedchem.9b01154

Abstact

Chitinases not only play vital roles in the human innate immune system but are also essential for the development of pathogenic fungi and pests. Chitinase inhibitors are efficient tools to investigate the elusive role of human chitinases and to control pathogens and pests. Via hierarchical virtual screening, we have discovered a series of chitinase inhibitors with a novel scaffold that have high inhibitory activities and selectivities against human and insect chitinases. The most potent human chitotriosidase inhibitor, compound 40, exhibited a Ki of 49 nM, and the most potent inhibitor of the insect pest chitinase OfChi-h, compound 53, exhibited a Ki of 9 nM. The binding of these two most potent inhibitors was confirmed by X-ray crystallography. In a murine model of bleomycin-induced pulmonary fibrosis, compound 40 was found to suppress the chitotriosidase activity by 60%, leading to a significant increase in inflammatory cells and suggesting that chitotriosidase played a protective role.

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