6JLZ image
Deposition Date 2019-03-07
Release Date 2019-05-01
Last Version Date 2024-11-06
Entry Detail
PDB ID:
6JLZ
Keywords:
Title:
P-eIF2a - eIF2B complex
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.35 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Translation initiation factor eIF-2B subunit alpha
Gene (Uniprot):gcn3
Chain IDs:A, B
Chain Length:341
Number of Molecules:2
Biological Source:Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Probable translation initiation factor eIF-2B subunit beta
Gene (Uniprot):tif222
Chain IDs:C, D
Chain Length:399
Number of Molecules:2
Biological Source:Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Probable translation initiation factor eIF-2B subunit gamma
Gene (Uniprot):tif223
Chain IDs:E, F
Chain Length:458
Number of Molecules:2
Biological Source:Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Probable translation initiation factor eIF-2B subunit delta
Gene (Uniprot):tif224
Chain IDs:G, H
Chain Length:467
Number of Molecules:2
Biological Source:Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Probable translation initiation factor eIF-2B subunit epsilon
Gene (Uniprot):tif225
Chain IDs:I, J
Chain Length:678
Number of Molecules:2
Biological Source:Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Eukaryotic translation initiation factor 2 subunit alpha
Gene (Uniprot):SUI2
Chain IDs:K (auth: L), L (auth: M)
Chain Length:304
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
SEP K SER modified residue
Ligand Molecules
Primary Citation
Structural basis for eIF2B inhibition in integrated stress response.
Science 364 495 499 (2019)
PMID: 31048492 DOI: 10.1126/science.aaw4104

Abstact

A core event in the integrated stress response, an adaptive pathway common to all eukaryotic cells in response to various stress stimuli, is the phosphorylation of eukaryotic translation initiation factor 2 (eIF2). Normally, unphosphorylated eIF2 transfers the methionylated initiator tRNA to the ribosome in a guanosine 5'-triphosphate-dependent manner. By contrast, phosphorylated eIF2 inhibits its specific guanine nucleotide exchange factor, eIF2B. To elucidate how the eIF2 phosphorylation status regulates the eIF2B activity, we determined cryo-electron microscopic and crystallographic structures of eIF2B in complex with unphosphorylated or phosphorylated eIF2. The unphosphorylated and phosphorylated forms of eIF2 bind to eIF2B in completely different manners: the nucleotide exchange-active and -inactive modes, respectively. These structures explain how phosphorylated eIF2 dominantly inhibits the nucleotide exchange activity of eIF2B.

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Primary Citation of related structures