6JLS image
Deposition Date 2019-03-06
Release Date 2019-06-26
Last Version Date 2023-11-22
Entry Detail
PDB ID:
6JLS
Title:
Crystal Structure of FMN-dependent Cysteine Decarboxylases TvaF from Thioviridamide Biosynthesis
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.24 Å
R-Value Free:
0.23
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
F 41 3 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Putative flavoprotein decarboxylase
Gene (Uniprot):tvaF
Chain IDs:A
Chain Length:200
Number of Molecules:1
Biological Source:Streptomyces olivoviridis
Ligand Molecules
Primary Citation
Characterization of the FMN-Dependent Cysteine Decarboxylase from Thioviridamide Biosynthesis.
Org.Lett. 21 4676 4679 (2019)
PMID: 31184189 DOI: 10.1021/acs.orglett.9b01531

Abstact

The biosynthesis of thioviridamide-like compounds has not been elucidated. Herein, we report that TvaF from the thioviridamide biosynthetic gene cluster is an FMN-dependent cysteine decarboxylase that transforms the C-terminal cysteine of precursor peptides into a thioenol motif and exhibits high substrate flexibility. We resolved the crystal structure of TvaF bound with FMN at 2.24 Å resolution. Key residues for FMN binding and catalytic activity of TvaF have been identified and evaluated by mutagenesis studies.

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Primary Citation of related structures
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