6JLI image
Deposition Date 2019-03-06
Release Date 2019-07-17
Last Version Date 2024-10-16
Entry Detail
PDB ID:
6JLI
Keywords:
Title:
Crystal structure of CTLD7 domain of human PLA2R
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.78 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Secretory phospholipase A2 receptor
Gene (Uniprot):PLA2R1
Chain IDs:A
Chain Length:133
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Crystal structure of the CTLD7 domain of human M-type phospholipase A2 receptor.
J.Struct.Biol. 207 295 300 (2019)
PMID: 31271865 DOI: 10.1016/j.jsb.2019.06.007

Abstact

M-type phospholipase A2 receptor (PLA2R) is a member of the mannose receptor family. Recent evidence shows that PLA2R is a major autoantigen causing idiopathic membranous nephropathy (IMN), which is an autoimmune disease and one of the most common causes for nephrotic syndrome in adults. The epitope mapping data suggest that the major epitopes of PLA2R locate at the CysR, CTLD1 and CTLD7 domains. However, due to the lack of the high-resolution structural information, it is unclear how the autoantibodies interact with PLA2R. Here we determine the crystal structure of the CTLD7 domain of PLA2R at 1.8 Å, showing that it adopts a typical CTLD fold, and the structural alignments also provide hints for the potential antibody binding regions. In addition, the high-resolution structural information of CTLD7 could be applied to identify the epitopes for autoantibodies, which would facilitate the therapeutic strategies against IMN.

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Primary Citation of related structures