6JLH image
Entry Detail
PDB ID:
6JLH
Title:
Structure of SCGN in complex with a Snap25 peptide
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-03-05
Release Date:
2020-03-11
Method Details:
Experimental Method:
Resolution:
2.37 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Secretagogin
Chain IDs:A, C
Chain Length:261
Number of Molecules:2
Biological Source:Danio rerio
Polymer Type:polypeptide(L)
Description:Synaptosomal-associated protein 25
Chain IDs:B, D
Chain Length:17
Number of Molecules:2
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Primary Citation
Structural and mechanistic insights into secretagogin-mediated exocytosis.
Proc.Natl.Acad.Sci.USA 117 6559 6570 (2020)
PMID: 32156735 DOI: 10.1073/pnas.1919698117

Abstact

Secretagogin (SCGN) is a hexa-EF-hand protein that is highly expressed in the pancreas, brain, and gastrointestinal tract. SCGN is known to modulate regulated exocytosis in multiple cell lines and tissues; however, its exact functions and underlying mechanisms remain unclear. Here, we report that SCGN interacts with the plasma membrane SNARE SNAP-25, but not the assembled SNARE complex, in a Ca2+-dependent manner. The crystal structure of SCGN in complex with a SNAP-25 fragment reveals that SNAP-25 adopts a helical structure and binds to EF-hands 5 and 6 of SCGN. SCGN strongly inhibits SNARE-mediated vesicle fusion in vitro by binding to SNAP-25. SCGN promotes the plasma membrane localization of SNAP-25, but not Syntaxin-1a, in SCGN-expressing cells. Finally, SCGN controls neuronal growth and brain development in zebrafish, likely via interacting with SNAP-25 or its close homolog, SNAP-23. Our results thus provide insights into the regulation of SNAREs and suggest that aberrant synapse functions underlie multiple neurological disorders caused by SCGN deficiency.

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