6JBX image
Deposition Date 2019-01-27
Release Date 2019-07-24
Last Version Date 2024-03-27
Entry Detail
PDB ID:
6JBX
Title:
Crystal structure of Streptococcus pneumoniae FabT in complex with DNA
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Fatty acid biosynthesis transcriptional regulator
Chain IDs:A, B
Chain Length:152
Number of Molecules:2
Biological Source:Streptococcus pneumoniae
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*AP*AP*TP*AP*GP*TP*TP*TP*GP*AP*CP*TP*GP*TP*CP*AP*AP*AP*TP*TP*AP*TP*G)-3')
Chain IDs:C
Chain Length:23
Number of Molecules:1
Biological Source:Streptococcus pneumoniae
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*CP*AP*TP*AP*AP*TP*TP*TP*GP*AP*CP*AP*GP*TP*CP*AP*AP*AP*CP*TP*AP*TP*T)-3')
Chain IDs:D
Chain Length:23
Number of Molecules:1
Biological Source:Streptococcus pneumoniae
Ligand Molecules
Primary Citation
Structural insights into repression of the Pneumococcal fatty acid synthesis pathway by repressor FabT and co-repressor acyl-ACP.
Febs Lett. 593 2730 2741 (2019)
PMID: 31291684 DOI: 10.1002/1873-3468.13534

Abstact

The Streptococcus pneumoniae fatty acid synthesis (FAS) pathway is globally controlled at the transcriptional level by the repressor FabT and its co-repressor acyl carrier protein (acyl-ACP), the intermediate of phospholipid synthesis. Here, we report the crystal structure of FabT complexed with a 23-bp dsDNA, which indicates that FabT is a weak repressor with low DNA-binding affinity in the absence of acyl-ACP. Modification of ACP with a long-chain fatty acid is necessary for the formation of a stable complex with FabT, mimicked in vitro by cross-linking, which significantly elevates the DNA-binding affinity of FabT. Altogether, we propose a putative working model of gene repression under the double control of FabT and acyl-ACP, elucidating a distinct repression network for Pneumococcus to precisely coordinate FAS.

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Primary Citation of related structures