6JBV image
Entry Detail
PDB ID:
6JBV
Keywords:
Title:
Crystal structure of SpaE basal pilin from Lactobacillus rhamnosus GG - Selenium derivative
Biological Source:
PDB Version:
Deposition Date:
2019-01-26
Release Date:
2019-06-26
Method Details:
Experimental Method:
Resolution:
1.71 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Pilus assembly protein
Chain IDs:A
Chain Length:400
Number of Molecules:1
Biological Source:Lactobacillus rhamnosus (strain ATCC 53103 / GG)
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Ligand Molecules
Primary Citation
Crystal structure of basal pilin SpaE reveals the molecular basis of its incorporation in the lactobacillar SpaFED pilus.
J.Struct.Biol. 207 74 84 (2019)
PMID: 31026587 DOI: 10.1016/j.jsb.2019.04.016

Abstact

For some Gram-positive genera and species, the long-extended and adhesive sortase-dependent pilus plays an essential role during host colonization, biofilm formation, and immune modulation. Lactobacillus rhamnosus GG is a gut-adapted commensal strain that harbors the operonic genes for the SpaCBA and SpaFED pili, both being comprised of three different protein subunits termed the backbone, tip, and basal pilins. Crystal structures of the backbone pilins (SpaA and SpaD) have recently been solved, and here we describe the high-resolution (1.5 Å) structural determination of the SpaE basal pilin. SpaE consists of two immunoglobulin-like CnaB domains, with each displaying a spontaneously formed internal isopeptide bond, though apparently slow forming in the N-terminal domain. Remarkably, SpaE contains an atypically lengthy unstructured C-terminal tail, along with an YPKN pilin motif peptide, which is normally reserved for backbone subunits. Based on our analysis of the crystal structure data, we provide a molecular model for the basal positioning of the SpaE pilin within the SpaFED pilus.

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Primary Citation of related structures