6J55 image
Deposition Date 2019-01-10
Release Date 2019-07-17
Last Version Date 2024-03-20
Entry Detail
PDB ID:
6J55
Keywords:
Title:
Crystal structure of an iron superoxide dismutate (FeSOD) from a pathogenic Acanthamoeba castellanii
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.33 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 61
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Superoxide dismutase
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:205
Number of Molecules:12
Biological Source:Acanthamoeba castellanii
Ligand Molecules
Primary Citation
Crystal structure of an iron superoxide dismutase from the pathogenic amoeba Acanthamoeba castellanii.
Acta Crystallogr.,Sect.F 75 480 488 (2019)
PMID: 31282867 DOI: 10.1107/S2053230X19008112

Abstact

The iron superoxide dismutase found in the pathogenic amoeba Acanthamoeba castellanii (AcFeSOD) may play essential roles in the survival of the parasite, not only by protecting it from endogenous oxidative stress but also by detoxifying oxidative killing of the parasite by host immune effector cells. The AcFeSOD protein was expressed in a stable form using an Escherichia coli expression system and was crystallized by the microbatch and hanging-drop vapour-diffusion methods. The structure was determined to 2.33 Å resolution from a single AcFeSOD crystal. The crystal belonged to the hexagonal space group P61 and contained 12 molecules forming three tetramers in the asymmetric unit, with an iron ion bound in each molecule. Structural comparisons and sequence alignment of AcFeSOD with other FeSODs showed a well conserved overall fold and conserved active-site residues with subtle differences.

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