6J10 image
Deposition Date 2018-12-27
Release Date 2019-04-17
Last Version Date 2024-10-23
Entry Detail
PDB ID:
6J10
Keywords:
Title:
Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.30
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Capsid protein
Gene (Uniprot):C
Mutations:Y132A
Chain IDs:A, B, C, D, E, F
Chain Length:149
Number of Molecules:6
Biological Source:Hepatitis B virus genotype D subtype adw
Ligand Molecules
Primary Citation
Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly.
Nat Commun 10 2184 2184 (2019)
PMID: 31097716 DOI: 10.1038/s41467-019-10200-5

Abstact

Chronic hepatitis B virus (HBV) infection can cause cirrhosis and hepatocellular carcinoma and is therefore a serious public health problem. Infected patients are currently treated with nucleoside/nucleotide analogs and interferon α, but this approach is not curative. Here, we screen 978 FDA-approved compounds for their ability to inhibit HBV replication in HBV-expressing HepG2.2.15 cells. We find that ciclopirox, a synthetic antifungal agent, strongly inhibits HBV replication in cells and in mice by blocking HBV capsid assembly. The crystal structure of the HBV core protein and ciclopirox complex reveals a unique binding mode at dimer-dimer interfaces. Ciclopirox synergizes with nucleoside/nucleotide analogs to prevent HBV replication in cells and in a humanized liver mouse model. Therefore, orally-administered ciclopirox may provide a novel opportunity to combat chronic HBV infection by blocking HBV capsid assembly.

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Primary Citation of related structures