6J0M image
Deposition Date 2018-12-24
Release Date 2019-04-10
Last Version Date 2024-03-27
Entry Detail
PDB ID:
6J0M
Title:
Cryo-EM Structure of an Extracellular Contractile Injection System, PVC baseplate in extended state (reconstructed with C3 symmetry)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.90 Å
Aggregation State:
HELICAL ARRAY
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Pvc8
Chain IDs:A, B, C
Chain Length:538
Number of Molecules:3
Biological Source:Photorhabdus asymbiotica
Ligand Molecules
Primary Citation
Cryo-EM Structure and Assembly of an Extracellular Contractile Injection System.
Cell 177 370 383.e15 (2019)
PMID: 30905475 DOI: 10.1016/j.cell.2019.02.020

Abstact

Contractile injection systems (CISs) are cell-puncturing nanodevices that share ancestry with contractile tail bacteriophages. Photorhabdus virulence cassette (PVC) represents one group of extracellular CISs that are present in both bacteria and archaea. Here, we report the cryo-EM structure of an intact PVC from P. asymbiotica. This over 10-MDa device resembles a simplified T4 phage tail, containing a hexagonal baseplate complex with six fibers and a capped 117-nanometer sheath-tube trunk. One distinct feature of the PVC is the presence of three variants for both tube and sheath proteins, indicating a functional specialization of them during evolution. The terminal hexameric cap docks onto the topmost layer of the inner tube and locks the outer sheath in pre-contraction state with six stretching arms. Our results on the PVC provide a framework for understanding the general mechanism of widespread CISs and pave the way for using them as delivery tools in biological or therapeutic applications.

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Primary Citation of related structures