6IYT image
Entry Detail
PDB ID:
6IYT
Keywords:
Title:
Crystal Structure of the acyltransferase domain from second module 14 of salinomycin polyketide synthase
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2018-12-17
Release Date:
2019-07-03
Method Details:
Experimental Method:
Resolution:
1.78 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Type I modular polyketide synthase
Chain IDs:A, B
Chain Length:467
Number of Molecules:2
Biological Source:Streptomyces albus subsp. albus
Primary Citation
Structural Insights into the Substrate Specificity of Acyltransferases from Salinomycin Polyketide Synthase.
Biochemistry 58 2978 2986 (2019)
PMID: 31199122 DOI: 10.1021/acs.biochem.9b00305

Abstact

Salinomycin with antibacterial and anticoccidial activities is a commercial polyether polyketide widely used in animal husbandry as a food additive. Malonyl-CoA (MCoA), methylmalonyl-CoA (MMCoA), and ethylmalonyl-CoA (EMCoA) are used as extension units in its biosynthesis. To understand how the salinomycin modular polyketide synthase (PKS) strictly discriminates among these extension units, the acyltransferase (AT) domains selecting MCoA, MMCoA, and EMCoA were structurally characterized. Molecular dynamics simulations of the AT structures helped to reveal the key interactions involved in enzyme-substrate recognitions, which enabled the engineering of AT mutants with switched specificity. The catalytic efficiencies (kcat/ Km) of these AT mutants are comparable with those of the wild-type AT domains. These results set the stage for engineering the AT substrate specificity of modular PKSs.

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