6IWB image
Entry Detail
PDB ID:
6IWB
Keywords:
Title:
Crystal structure of a computationally designed protein (LD3) in complex with BCL-2
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-12-05
Release Date:
2019-12-11
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.24
Space Group:
P 65
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Apolipoprotein E
Chain IDs:A, C
Chain Length:156
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Apoptosis regulator Bcl-2,Apoptosis regulator Bcl-2
Chain IDs:B, D
Chain Length:166
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
A computationally designed chimeric antigen receptor provides a small-molecule safety switch for T-cell therapy.
Nat.Biotechnol. 38 426 432 (2020)
PMID: 32015549 DOI: 10.1038/s41587-019-0403-9

Abstact

Approaches to increase the activity of chimeric antigen receptor (CAR)-T cells against solid tumors may also increase the risk of toxicity and other side effects. To improve the safety of CAR-T-cell therapy, we computationally designed a chemically disruptable heterodimer (CDH) based on the binding of two human proteins. The CDH self-assembles, can be disrupted by a small-molecule drug and has a high-affinity protein interface with minimal amino acid deviation from wild-type human proteins. We incorporated the CDH into a synthetic heterodimeric CAR, called STOP-CAR, that has an antigen-recognition chain and a CD3ζ- and CD28-containing endodomain signaling chain. We tested STOP-CAR-T cells specific for two antigens in vitro and in vivo and found similar antitumor activity compared to second-generation (2G) CAR-T cells. Timed administration of the small-molecule drug dynamically inactivated the activity of STOP-CAR-T cells. Our work highlights the potential for structure-based design to add controllable elements to synthetic cellular therapies.

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Primary Citation of related structures