6IEQ image
Entry Detail
PDB ID:
6IEQ
Keywords:
Title:
Crystal Structure of HIV-1 Env ConM SOSIP.v7 in Complex with bNAb PGT124 and 35O22
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2018-09-16
Release Date:
2019-05-22
Method Details:
Experimental Method:
Resolution:
3.90 Å
R-Value Free:
0.29
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 63
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Envelope glycoprotein gp160
Chain IDs:B
Chain Length:153
Number of Molecules:1
Biological Source:Human immunodeficiency virus 1
Polymer Type:polypeptide(L)
Description:35O22 Fab Heavy Chain
Chain IDs:E (auth: D)
Chain Length:240
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:35O22 Fab Light Chain
Chain IDs:F (auth: E)
Chain Length:216
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Envelope glycoprotein gp160
Chain IDs:A (auth: G)
Chain Length:497
Number of Molecules:1
Biological Source:Human immunodeficiency virus 1
Polymer Type:polypeptide(L)
Description:PGT124 Fab Heavy Chain
Chain IDs:D (auth: H)
Chain Length:236
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:PGT124 Fab Light Chain
Chain IDs:C (auth: L)
Chain Length:214
Number of Molecules:1
Biological Source:Homo sapiens
Peptide-like Molecules
PRD_900118
Primary Citation

Abstact

Stabilized HIV-1 envelope glycoproteins (Env) that resemble the native Env are utilized in vaccination strategies aimed at inducing broadly neutralizing antibodies (bNAbs). To limit the exposure of rare isolate-specific antigenic residues/determinants we generated a SOSIP trimer based on a consensus sequence of all HIV-1 group M isolates (ConM). The ConM trimer displays the epitopes of most known bNAbs and several germline bNAb precursors. The crystal structure of the ConM trimer at 3.9 Å resolution resembles that of the native Env trimer and its antigenic surface displays few rare residues. The ConM trimer elicits strong NAb responses against the autologous virus in rabbits and macaques that are significantly enhanced when it is presented on ferritin nanoparticles. The dominant NAb specificity is directed against an epitope at or close to the trimer apex. Immunogens based on consensus sequences might have utility in engineering vaccines against HIV-1 and other viruses.

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Primary Citation of related structures