6IC3 image
Deposition Date 2018-12-02
Release Date 2019-04-03
Last Version Date 2024-11-13
Entry Detail
PDB ID:
6IC3
Keywords:
Title:
AL amyloid fibril from a lambda 1 light chain
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
3.30 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:lambda 1 light chain fragment, residues 3-118
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:116
Number of Molecules:8
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Cryo-EM structure of a light chain-derived amyloid fibril from a patient with systemic AL amyloidosis.
Nat Commun 10 1103 1103 (2019)
PMID: 30894526 DOI: 10.1038/s41467-019-09032-0

Abstact

Amyloid fibrils derived from antibody light chains are key pathogenic agents in systemic AL amyloidosis. They can be deposited in multiple organs but cardiac amyloid is the major risk factor of mortality. Here we report the structure of a λ1 AL amyloid fibril from an explanted human heart at a resolution of 3.3 Å which we determined using cryo-electron microscopy. The fibril core consists of a 91-residue segment presenting an all-beta fold with ten mutagenic changes compared to the germ line. The conformation differs substantially from natively folded light chains: a rotational switch around the intramolecular disulphide bond being the crucial structural rearrangement underlying fibril formation. Our structure provides insight into the mechanism of protein misfolding and the role of patient-specific mutations in pathogenicity.

Legend

Protein

Chemical

Disease

Primary Citation of related structures